{
  "_id": "6a50996d89c83ec243a2e68e",
  "Package": "ALFAM2",
  "Type": "Package",
  "Title": "Dynamic Model of Ammonia Emission from Field-Applied Manure",
  "Version": "4.2.14",
  "Date": "2025-12-05",
  "Authors@R": "c(person(\"Sasha D.\", \"Hafner\", role = c(\"aut\", \"cre\"), email = \"sasha.hafner@bce.au.dk\", comment = c(ORCID = \"0000-0003-0955-0327\")),\nperson(\"Christoph\", \"Haeni\", role = \"aut\", comment = c(ORCID = \"0000-0003-1458-1849\")),\nperson(\"Roland\", \"Fuss\", role = \"aut\", email = \"roland.fuss@thuenen.de\", comment = c(ORCID = \"0000-0002-0274-0809\")),\nperson(\"Frederik\", \"Dalby\", role = \"aut\", comment = c(ORCID = \"0000-0003-2437-064X\")),\nperson(\"Johanna\", \"Pedersen\", role = \"ctb\", comment = c(ORCID = \"0000-0002-9026-5031\")),\nperson(\"Valdemar\", \"Petersen\", role = \"ctb\"))",
  "Maintainer": "Sasha D. Hafner <sasha.hafner@bce.au.dk>",
  "Description": "An implementation of the ALFAM2 dynamic emission model for\nammonia volatilization from field-applied animal slurry (manure\nwith dry matter below about 15%). The model can be used to\npredict cumulative emission and emission rate of ammonia\nfollowing field application of slurry. Predictions may be\nuseful for emission inventory calculations, fertilizer\nmanagement, assessment of mitigation strategies, or research\naimed at understanding ammonia emission. Default parameter sets\ninclude effects of application method, slurry composition, and\nweather. The model structure is based on a simplified\nrepresentation of the physical-chemical slurry-soil-atmosphere\nsystem. More information is available via citation(\"ALFAM2\").",
  "License": "GPL-3",
  "URL": "https://github.com/AU-BCE-EE/ALFAM2/,\nhttps://projects.au.dk/alfam/",
  "VignetteBuilder": "knitr",
  "LazyData": "true",
  "Repository": "https://au-bce-ee.r-universe.dev",
  "Date/Publication": "2026-04-08 09:26:34 UTC",
  "RemoteUrl": "https://github.com/au-bce-ee/alfam2",
  "RemoteRef": "HEAD",
  "RemoteSha": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-10 06:58:18 UTC",
    "User": "root"
  },
  "Author": "Sasha D. Hafner [aut, cre] (ORCID:\n<https://orcid.org/0000-0003-0955-0327>),\nChristoph Haeni [aut] (ORCID: <https://orcid.org/0000-0003-1458-1849>),\nRoland Fuss [aut] (ORCID: <https://orcid.org/0000-0002-0274-0809>),\nFrederik Dalby [aut] (ORCID: <https://orcid.org/0000-0003-2437-064X>),\nJohanna Pedersen [ctb] (ORCID: <https://orcid.org/0000-0002-9026-5031>),\nValdemar Petersen [ctb]",
  "_user": "au-bce-ee",
  "_type": "src",
  "_file": "ALFAM2_4.2.14.tar.gz",
  "_fileid": "https://r2.ropensci.org/8a9904256fcc58f8ff2458c5931c53537d014a7443e014cedcfa936f32e93fbd",
  "_filesize": 833326,
  "_sha256": "8a9904256fcc58f8ff2458c5931c53537d014a7443e014cedcfa936f32e93fbd",
  "_expires": "2026-10-18T07:04:11.000Z",
  "_created": "2026-07-10T06:58:18.000Z",
  "_published": "2026-07-10T07:04:13.671Z",
  "_jobs": [
    {
      "job": 86305447629,
      "time": 153,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8220504687"
    },
    {
      "job": 86305447663,
      "time": 131,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8220497083"
    },
    {
      "job": 86305447635,
      "time": 169,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220509600"
    },
    {
      "job": 86305447642,
      "time": 124,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220495473"
    },
    {
      "job": 86305447643,
      "time": 187,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8220511955"
    },
    {
      "job": 86305447646,
      "time": 250,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8220543787"
    },
    {
      "job": 86305447688,
      "time": 133,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220508320"
    },
    {
      "job": 86305447655,
      "time": 271,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220542261"
    },
    {
      "job": 86304942515,
      "time": 207,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220460398"
    },
    {
      "job": 86305447638,
      "time": 102,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8220489506"
    },
    {
      "job": 86305447659,
      "time": 88,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8220485488"
    },
    {
      "job": 86305447631,
      "time": 78,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8220482938"
    },
    {
      "job": 86305447653,
      "time": 103,
      "config": "windows-release",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8220489869"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319",
  "_status": "success",
  "_upstream": "https://github.com/au-bce-ee/alfam2",
  "_commit": {
    "id": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
    "author": "Sasha D. Hafner <sasha@hafnerconsulting.com>",
    "committer": "Sasha D. Hafner <sasha@hafnerconsulting.com>",
    "message": "switch devtools to remotes in README\n",
    "time": 1775640394
  },
  "_maintainer": {
    "name": "Sasha D. Hafner",
    "email": "sasha.hafner@bce.au.dk",
    "login": "sashahafner",
    "description": "",
    "uuid": 35272876,
    "orcid": "0000-0003-0955-0327"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5.0",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.8",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "tinytest",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    }
  ],
  "_owner": "au-bce-ee",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-38",
      "n": 1
    },
    {
      "week": "2025-44",
      "n": 1
    },
    {
      "week": "2025-48",
      "n": 2
    },
    {
      "week": "2025-49",
      "n": 3
    },
    {
      "week": "2026-15",
      "n": 1
    }
  ],
  "_tags": [
    {
      "name": "v4.2.14",
      "date": "2025-12-05"
    }
  ],
  "_stars": 9,
  "_contributors": [
    {
      "user": "sashahafner",
      "count": 460,
      "uuid": 35272876
    },
    {
      "user": "chhaeni",
      "count": 38,
      "uuid": 17614871
    },
    {
      "user": "johannapedersen",
      "count": 1,
      "uuid": 96528149
    },
    {
      "user": "ecoroland2",
      "count": 1,
      "uuid": 72126727
    }
  ],
  "_userbio": {
    "uuid": 112507299,
    "type": "organization",
    "name": "Environmental Engineering",
    "followers": 17,
    "description": "Work by the section of Environmental Engineering in the Department of Biological and Chemical Engineering at Aarhus University"
  },
  "_downloads": {
    "count": 316,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ALFAM2"
  },
  "_devurl": "https://github.com/au-bce-ee/alfam2",
  "_searchresults": 54,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/ALFAM2.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/au-bce-ee/alfam2",
  "_realowner": "au-bce-ee",
  "_cranurl": true,
  "_releases": [
    {
      "version": "4.0",
      "date": "2024-06-05"
    },
    {
      "version": "4.1.3",
      "date": "2024-06-17"
    },
    {
      "version": "4.2",
      "date": "2024-11-08"
    },
    {
      "version": "4.2.14",
      "date": "2025-12-11"
    }
  ],
  "_exports": [
    "alfam2"
  ],
  "_datasets": [
    {
      "name": "alfam2pars01",
      "title": "Default Parameter Sets for the ALFAM2 Model",
      "object": "alfam2pars01",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "alfam2pars02",
      "title": "Default Parameter Sets for the ALFAM2 Model",
      "object": "alfam2pars02",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "alfam2pars03",
      "title": "Default Parameter Sets for the ALFAM2 Model",
      "object": "alfam2pars03",
      "class": [
        "numeric"
      ],
      "fields": [],
      "table": false,
      "tojson": true
    },
    {
      "name": "alfam2pars03var",
      "title": "Default Parameter Sets for the ALFAM2 Model",
      "object": "alfam2pars03var",
      "class": [
        "matrix",
        "array"
      ],
      "fields": [
        "int.f0",
        "app.mthd.os.f0",
        "app.mthd.cs.f0",
        "man.source.pig.f0",
        "man.dm.f0",
        "int.r1",
        "app.mthd.bc.r1",
        "app.mthd.ts.r1",
        "man.dm.r1",
        "man.ph.r1",
        "air.temp.r1",
        "wind.sqrt.r1",
        "int.r2",
        "rain.rate.r2",
        "int.r3",
        "app.mthd.cs.r3",
        "incorp.deep.r3",
        "man.ph.r3",
        "incorp.shallow.f4",
        "incorp.deep.f4",
        "int.r5",
        "rain.rate.r5"
      ],
      "rows": 100,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "alfam2",
      "title": "Predict Ammonia Emission from Field-Applied Manure",
      "topics": [
        "alfam2"
      ]
    },
    {
      "page": "alfam2pars",
      "title": "Default Parameter Sets for the ALFAM2 Model",
      "topics": [
        "alfam2pars",
        "alfam2pars01",
        "alfam2pars02",
        "alfam2pars03",
        "alfam2pars03var"
      ]
    },
    {
      "page": "alfami",
      "title": "Emissions Inventory Calculations of Ammonia Emission from Field-Applied Manure",
      "topics": [
        "alfami"
      ]
    }
  ],
  "_readme": "https://github.com/au-bce-ee/alfam2/raw/HEAD/README.md",
  "_rundeps": [
    "Rcpp"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_vignettes": [
    {
      "source": "ALFAM2-start.Rmd",
      "filename": "ALFAM2-start.html",
      "title": "Getting started with the ALFAM2 package",
      "engine": "knitr::rmarkdown",
      "headings": [
        "Introduction",
        "Excel or R?",
        "Some basics for new R users",
        "Installing the ALFAM2 package",
        "The alfam2() function",
        "Overview of the function",
        "Cumulative emission for a single scenario",
        "Application method names",
        "Adding incorporation",
        "Relative emission only",
        "Multiple scenarios in a single call",
        "Dummy variables",
        "Volatilization dynamics",
        "Faster evaluation",
        "Confidence intervals",
        "Data import and export",
        "Warnings and error messages",
        "Acknowledgements",
        "References"
      ],
      "created": "2024-05-15 23:53:51",
      "modified": "2025-12-05 15:35:53",
      "commits": 20
    }
  ],
  "_score": 6.5616975326539935,
  "_indexed": true,
  "_nocasepkg": "alfam2",
  "_universes": [
    "au-bce-ee",
    "sashahafner"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "4.2.14",
      "date": "2026-07-10T07:00:52.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/56a7f89208666c3f0dc6a9e99cf1b325deb5421a2feb894382e8d1b03853171a",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "4.2.14",
      "date": "2026-07-10T07:00:26.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/38e4e4a86acf6b6e6f779bf9b0b551a40eaae52b0e3c954cc9a321bb532486f2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "4.2.14",
      "date": "2026-07-10T07:01:12.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/f9b8eb0ee3c186a5bd671fd9294ee64c354265d560a24ae1dafb95019a5b62bd",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "4.2.14",
      "date": "2026-07-10T07:00:25.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/11f9a6832fc9e6e4382024e48c5ce070fd6a324e3407ab9886263278436961bb",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "4.2.14",
      "date": "2026-07-10T07:01:14.000Z",
      "arch": "aarch64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/a3df0c157427072b910a137d44c32bb551e1be6bf8bb7e09456eba0686dc5481",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "4.2.14",
      "date": "2026-07-10T07:02:47.000Z",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/ecc98aef14297c63d01af31873ae4f803e39d62b50e4ab8e0d5a2129ec4acea2",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "4.2.14",
      "date": "2026-07-10T07:01:05.000Z",
      "arch": "aarch64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/0267cdcd91b53faa6fd181a4955171eb89ffb8c50bc8cebe91429659f83f32d0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "4.2.14",
      "date": "2026-07-10T07:02:40.000Z",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/fe885a22833b1dcd627d242efb2d6b35796297d95eb1037df3e18c0d2a59e0b0",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "4.2.14",
      "date": "2026-07-10T07:00:16.000Z",
      "arch": "emscripten",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/d09f1c0f80817e8f2f5621bf1b97c4c59f6e6263ecd63fcb558507ea34f732ab",
      "status": "success",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "4.2.14",
      "date": "2026-07-10T06:59:25.000Z",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/c1697f57beeff8e17ccdcc0cb55c702cb348fae0e3f16f4708b985375f503f70",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "4.2.14",
      "date": "2026-07-10T06:59:19.000Z",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/8779538d58ecb87f9466d1d24d077046bdd3b682173e75cf890db20e5b04cc3f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "4.2.14",
      "date": "2026-07-10T06:59:41.000Z",
      "arch": "x86_64",
      "commit": "5a4a6d0d53c8c98110ae8a8a99aed7ab4027d6cf",
      "fileid": "https://r2.ropensci.org/d2234fd102f05556551fea0054f636c125e6949e59972091989f0e36a2defcc9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/au-bce-ee/actions/runs/29075120319"
    }
  ]
}